Journal of Chemical Theory and Computation (JCTC) - 2023 PLOS Computational Biology - 2018,2015 PLOS One - 2022 Proteins: Structure, Function, and Bioinformatics (Proteins) - 2021,2016,2015(3),2014 Physical Biology (PB) - 2023,2020,2018(2),2016(2),2014 Physical Chemistry Chemical Physics (PCCP) Journal of Molecular Biology (JMB) Bioinformatics Biochemistry Biophysical Journal BMC Structural Biology Current Opinion in Structural Biology Journal of Chemical Physics IEEE/ACM Transactions on Computational Biology and Bioinformatics Journal of Computational Biology Journal of Computational Biophysics and Chemistry Journal of Computer-Aided Molecular Design Journal of General Physiology Journal of Molecular Graphics and Modelling Physical Review Letters (PRL) Proceedings of the National Academy of Sciences of the United States of America (PNAS, PNAS USA) Protein Science Journal of Applied Physics The Journal of Physical Chemistry B Journal of Chemical Information and Modeling (ACS)
ACM-BCB - ACM Conference on Bioinformatics, Computational Biology and Biomedicine, Mar-Apr
( 2022 , 2021 , 2020
, 2019 , 2018 , 2017 , 2016
)
RECOMB - International Conference on Research in Computational Molecular Biology, Jun
( 2023 , 2022 , 2021
, 2019 , 2018
)
ISCB - International Society for Computational Biology
BIBE - IEEE International Symposium of Bioinformatic and Bioengineering
( 2023 , 2022 , 2021 , 2020
)
ECCB - European Conference on Computational Biology
( 2024
)
PSB - Pacific Symposium on Biocomputing
WABI - Workshop on Algorithms in Bioinformatics, Sep
( 2023 , 2022, 2021 , 2020
, 2019 , 2018, 2017
)
BIBM - The IEEE International Conference on Bioinformatics and Biomedicine, Nov-Dec
( 2023 , 2022 , 2021 , 2020
, 2019
)
APBC – The Asia Pacific Bioinformatics Conference, Feb
( 2023 , 2022 , 2021 , 2020
, 2019
)
CSBW - The Computational Structural Bioinformatics Workshop, Sep-Dec
( 2019 , 2020,2023
)
ICBP - International Conference on Biological Physics, Aug-14-18, 2023
( 2023 , 2022 , 2021
)
MCBIOS - Midsouth Computational Biology and Bioinformatics Society
( 2024 , 2023 , 2022 , 2020
, 2019
)
RCSB PDB - Research Collaboratory for Structural Bioinformatics Protein Data BankUniProt - a freely accessible database of protein sequence and functional information.CATH - Protein Structure Classification databaseSCOP - Structural Classification of Proteins databaseEMDB - Electron Microscopy Data Bank, a public repository for electron cryo-microscopy maps and tomograms of macromolecular complexes and subcellular structures. SAMPL - the Statistical Assessment of Modeling of Proteins and Ligands challenge series
( wikipedia )The SAMPL Challenges
(
, SAMPL9 repository
, SAMPL8 repository
, ...
)
RDKit - an open source toolkit for cheminformatics that provides functionality for working with molecules, chemical reactions, fingerprints, descriptors, pharmacophores, etc. (Bing Chat)Open Babel - a chemical toolbox designed to speak the many languages of chemical data. It is an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. (Bing Chat)